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BEGIN:VEVENT
DTSTART;VALUE=DATE:20181027
DTEND;VALUE=DATE:20181028
DTSTAMP:20260503T232614
CREATED:20190326T082208Z
LAST-MODIFIED:20190326T082242Z
UID:33465-1540598400-1540684799@www.h-its.org
SUMMARY:FAIRDOM User Meeting
DESCRIPTION:
URL:https://www.h-its.org/event/fairdom-user-meeting/
LOCATION:Lyon\, Lyon\, France
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20181027
DTEND;VALUE=DATE:20181028
DTSTAMP:20260503T232614
CREATED:20190326T082324Z
LAST-MODIFIED:20190326T082324Z
UID:33468-1540598400-1540684799@www.h-its.org
SUMMARY:COMBINE & de.NBI Tutorial: Modelling and Simulation Tools in Systems Biology
DESCRIPTION:
URL:https://www.h-its.org/event/combine-de-nbi-tutorial-modelling-and-simulation-tools-in-systems-biology/
LOCATION:Lyon\, Lyon\, France
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20180903
DTEND;VALUE=DATE:20180908
DTSTAMP:20260503T232614
CREATED:20190326T082446Z
LAST-MODIFIED:20190326T082714Z
UID:33470-1535932800-1536364799@www.h-its.org
SUMMARY:de.NBI Summer School 2018: Riding the Data Life Cycle
DESCRIPTION:
URL:https://www.h-its.org/event/de-nbi-summer-school-2018-riding-the-data-life-cycle/
LOCATION:Braunschweig\, Braunschweig\, Germany
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20180704
DTEND;VALUE=DATE:20180705
DTSTAMP:20260503T232614
CREATED:20190326T082805Z
LAST-MODIFIED:20190326T082805Z
UID:33473-1530662400-1530748799@www.h-its.org
SUMMARY:How to share FAIR — The FAIRDOM Data and Model Management Practice
DESCRIPTION:
URL:https://www.h-its.org/event/how-to-share-fair-the-fairdom-data-and-model-management-practice/
LOCATION:Bremen\, Bremen\, Germany
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20180426
DTEND;VALUE=DATE:20180429
DTSTAMP:20260503T232614
CREATED:20190326T082908Z
LAST-MODIFIED:20200218T095739Z
UID:33476-1524700800-1524959999@www.h-its.org
SUMMARY:Tools for Systems biology modeling and data exchange: COPASI\, CellNetAnalyzer\, SABIO-RK\, SEEK
DESCRIPTION:
URL:https://www.h-its.org/event/tools-for-systems-biology-modeling-and-data-exchange-copasi-cellnetanalyzer-sabio-rk-seek/
LOCATION:Magdeburg\, Magdeburg\, Germany
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20180416
DTEND;VALUE=DATE:20180419
DTSTAMP:20260503T232614
CREATED:20190325T135754Z
LAST-MODIFIED:20190325T135754Z
UID:33321-1523836800-1524095999@www.h-its.org
SUMMARY:Announcing Fourth Biological Diffusion and Brownian Dynamics Brainstorm Meeting (BDBDB 4)
DESCRIPTION:Biological Diffusion and Brownian Dynamics Brainstorm 4 (BDBDB4) will\, like the previous meetings (the last was BDBDB3)\, provide a forum for intensive discussions about the current state of experimental and theoretical studies of biological diffusion\, with a focus on the Brownian Dynamics method for simulating biological macromolecules. The first BDBDB meeting was held in 2007 and they have taken place at irregular intervals since then. \nFurther information on BDBDB 4 could be found here.
URL:https://www.h-its.org/event/announcing-fourth-biological-diffusion-and-brownian-dynamics-brainstorm-meeting-bdbdb-4/
LOCATION:Studio Villa Bosch\, Schloss-Wolfsbrunnenweg 33\, Heidelberg\, 69118\, Germany
CATEGORIES:Workshops and Conferences
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BEGIN:VEVENT
DTSTART;VALUE=DATE:20171122
DTEND;VALUE=DATE:20171124
DTSTAMP:20260503T232614
CREATED:20190326T082955Z
LAST-MODIFIED:20190326T082955Z
UID:33479-1511308800-1511481599@www.h-its.org
SUMMARY:FAIRDOM – LiSyM – de.NBI Data Structuring Course
DESCRIPTION:
URL:https://www.h-its.org/event/fairdom-lisym-de-nbi-data-structuring-course/
LOCATION:Hünfeld\, Hünfeld\, Germany
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Berlin:20170806T080000
DTEND;TZID=Europe/Berlin:20170806T170000
DTSTAMP:20260503T232614
CREATED:20190326T083041Z
LAST-MODIFIED:20190326T083041Z
UID:33482-1502006400-1502038800@www.h-its.org
SUMMARY:COMBINE & de.NBI Tutorial: Modelling and Simulation Tools in Systems Biology
DESCRIPTION:
URL:https://www.h-its.org/event/combine-de-nbi-tutorial-modelling-and-simulation-tools-in-systems-biology-2/
LOCATION:Blacksburg\, Blacksburg\, VA\, United States
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20160530
DTEND;VALUE=DATE:20160601
DTSTAMP:20260503T232614
CREATED:20190326T083121Z
LAST-MODIFIED:20260413T121849Z
UID:33485-1464566400-1464739199@www.h-its.org
SUMMARY:Kinetics on the move: Workshop on Data for Computational Modeling
DESCRIPTION:
URL:https://www.h-its.org/event/kinetics-on-the-move-workshop-on-data-for-computational-modeling/
LOCATION:Heidelberg\, Heidelberg\, 69115\, Germany
END:VEVENT
BEGIN:VEVENT
DTSTART;VALUE=DATE:20151014
DTEND;VALUE=DATE:20151015
DTSTAMP:20260503T232614
CREATED:20190611T094800Z
LAST-MODIFIED:20190611T094800Z
UID:37423-1444780800-1444867199@www.h-its.org
SUMMARY:2015: Lectures and Hands-on sessions in computational molecular biophysics
DESCRIPTION:You find the lecture slides and the material for practicals here (restricted access). \nComputational Molecular Biophysics: Schedule\n\n\n\nDate\nL/P\nTopic\nLecturer\n\n\n14.10.\nL\nIntroduction into Mechanobiology\, MD\nFG\n\n\n21.10.\nP\nMD: Argon\nFG\n\n\n28.10.\nL\nMonte Carlo\, MD and force fields\nFG\n\n\n4.11.\nP\nMD: ubiquitin\nFG\n\n\n11.11.\nL\nMD and force probe MD\nFG\n\n\n18.11.\nL\nCalculating free energies in MD\nFG\n\n\n25.11.\nL\nMD with combined quantum/classical mechanics\nFG\n\n\n2.12.\nL\nCoarse graining\, multi-scale challenges\nFG\n\n\n9.12.\nP\nMD: ubiquitin\nFG\n\n\n16.12.\nP\nforce-probe MD: ubiquitin\nFG\n\n\n23.12.?\nL\nL/P finite element analysis\nFG\n\n\n13.1.\nP\nBD\nRW\n\n\n20.1.\nL\nBD\nRW\n\n\n27.1.\nP\nBD\nRW\n\n\n3.2.\nL\nBD\nRW\n\n\n\n  \nP: practical\, CIP POOL \nL: lecture\, seminar room \nTutors during tutorials: \nKatra Kolsek\, Csaba Daday\, Ana Herrera-Rodriguez \nHow can a bird sense magnetic fields\, how does our ear detect sound waves\, how does our bone feel gravitation? It is the physics of individual molecules that dictate these and many other processes in life. \nThis course introduces computational methods to study the structure\, dynamics and mechanics of biomolecules at different scales. It aims at endowing the students with an understanding of the principles\, the capacity and limitations of different numerical simulation techniques with an emphasis on Molecular Dynamics simulations. The course comprises alternating lectures and hands-on computer tutorials of which the latter are meant to directly demonstrate the principles of running and analyzing computer simulations of biological matter. Lectures and hands-on computer tutorials will take place alternately in the seminar room SR043 and the CIP-Pool (both Bioquant). The lectures/tutorials will take place once a week\, on Wed from 4 to 5.30 pm (2 SWS)\, starting now on October 14\, 2015. Lectures will be given by Prof. Frauke Gräter and  Prof. Rebecca Wade. \nThe lectures will be targeted to advanced Bachelor\, Master and interested PhD students and will be complemented by hands-on computer sessions in which the students will have the opportunity to run molecular simulations supervised by Dr. Katra Kolšek\, Dr. Csaba Daday and Ms. Ana Herrera-Rodriguez. \nResources:\n\nSchlick\, “Molecular Modelling and Simulation”\, Springer\, 2010\n\nM.P. Allen and Tildesley\, “Computer Simulation of Liquids”\, Oxford Science Publishers. (Great book with a focus on Molecular Dynamics simulations) \n\nFrenkel und B. Smit. “Understanding molecular simulation” Academic\, San Diego\, 2002\, (covers MD\, MC and Stat Mech)\nDill and S. Bromberg\, “Molecular Driving Forces”\, Taylor & Francis Inc\, 2010\n\nwww.gromacs.org open source molecular simulation software used in the tutorial\, for both atomistic MD and coarse-grained Brownian dynamics simulations. Comes with an extensive manual\, which includes the principles of MD simulations and biomolecular force fields. \nhttp://cando-dna-origami.org/ web-based finite element software for mechanics/dynamics of DNA sculptures
URL:https://www.h-its.org/event/2015-lectures-and-hands-on-sessions-in-computational-molecular-biophysics/
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