OmegaPlus
A parallel tool for rapid & scalable detection of selective sweeps in whole-genome datasets using the omega statistic.
RAxML(-NG) Web-Service
Available at the San Diego Supercomputer Center (supported by the NSF iPlant collaborative) To use this service you will first need …
MPTP Web Server
Access the new species delimitation web service using the new mptp approach.
Microbenchmark for Denormalized Floating Point Numbers
A small benchmark code, mainly for teaching purposes that can be used to highlight the performance impact of de-normalized floating point …
Reconfigurable Architectures (FPGAs)
Reconfigurable architectures for Bioinformatics applications designed by our former lab member Dr. Nikos Alachiotis.
File conversion scripts
Shell script for fasta to phylip conversion.Matlab programs by Lowie Li for fasta to phylip and&…
TreeCounter
Small program to compute the number of possible rooted and unrooted binary trees for n taxa or to compute the number …
Deep Convolutional Mixture Density Networks
The deep convolutional mixture density network (DCMDN) is a feed-forward neural network model, built combining a convolutional neural network (CNN) and …
Virtual Observatory Virtual Reality
The virtual observatory (VO) and its standards have become a success story in providing uniform access to a huge amount of …